PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT23511
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 186aa    MW: 20707.2 Da    PI: 4.7788
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT23511genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.23.6e-172372155
       AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
              s y+G+r++    +Wv+eIr+p++   ++r++lg++ t+e+Aa+a++ a+++l+g
  OIT23511 23 SVYRGIRRRN--RKWVSEIREPRK---TTRIWLGTYPTPEMAAAAYDVAALALKG 72
              78****9765..6********843...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MWSNHCPSNS TAISNRSEQG RHSVYRGIRR RNRKWVSEIR EPRKTTRIWL GTYPTPEMAA  60
AAYDVAALAL KGPDTPLNFP DSMCSYTMPA SLTAADIRAA AANAAAVRAP QLESEEARHQ  120
AECQPEAGDE GAMGQEYFDE EEVFGMPRLL VDMAEAMLVS PPRMKTTPYD ELPECSDASY  180
TLWSYP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.19e-39ERF family protein