PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT23679

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

DBB

Protein Properties

Length: 176aa MW: 19604.3 Da PI: 6.6891

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT23679	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	23.6	1.1e-07	4	33	5	34
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeH 34 C+ +e+ ++lfC ++ lC+ C ++ H OIT23679 4 LCDVCESAAAILFCAADEAALCRACDEKVH 33 7**************************998 PP
2	zf-B_box	30.8	6.2e-10	53	92	3	38
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg....Ht 38 ++C+ +e+ ++ ++Ce +++ lC +C + +H g H+ OIT23679 53 VPRCDICENAPAFFYCEVDGSSLCLQCDMIIHVGgkrtHS 92 689*****************************66666675 PP

Sequence ? help Back to Top
Protein Sequence Length: 176 aa Download sequence
MRTLCDVCES AAAILFCAAD EAALCRACDE KVHMCNKLAS RHVRVGLAKP DDVPRCDICE 60 NAPAFFYCEV DGSSLCLQCD MIIHVGGKRT HSRYLLLRQK VEFPGDKPGP TEELACKTLD 120 PSENKREYSH SPKPMVEDNQ QNRRFSPVPV SDGSADDHAK KDKMIDLNVK PSHYHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38960.1	5e-73	DBB family protein

Link Out ? help Back to Top
Ensembl	OIT23679