PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT23898
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NF-YB
Protein Properties Length: 202aa    MW: 22329.4 Da    PI: 4.4195
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT23898genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB43.48.5e-1428124596
     NF-YB   5 drflPianvsrimkkvlP...anakis..kdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
               ++ lP + v r++k  l    +++ is  +d+     e +  fi ++++ a+d c++ kr+tin++d++ al ++ f +++epl++ l+ +r+ +++
  OIT23898  28 QESLPKTIVRRLVKDKLSqlsTDTDISllRDSLLAFSESARIFIHYLSATANDTCKESKRQTINAEDVFKALEEIEFPEFIEPLRASLEVFRQRNSK 124
               5678888899999876541115666764467888889*******************************************************97765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MAEIEKQKDN KDKEKVAPAA AGGVQIEQES LPKTIVRRLV KDKLSQLSTD TDISLLRDSL  60
LAFSESARIF IHYLSATAND TCKESKRQTI NAEDVFKALE EIEFPEFIEP LRASLEVFRQ  120
RNSKRKSGSS KSAESNKKAK LKEPVENGKA KMKEQPSDTE NEDGQAGEQP SDNENEAGQA  180
AEQPSDNENE DGQAEGEDSG DE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27470.13e-29NF-YB family protein