PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT24477
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 265aa    MW: 29603.3 Da    PI: 5.3747
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT24477genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM96.25e-30111441128
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev..ikevdiykvePwdLp.k...kvkaeek..ewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
               lppG rF P+de+l+++yL  k ++++++ +++  i+e+d y+++P +Lp +   k+  + +  +w+ F+ r  k       +r +  gyWk+ g+ ++v+
  OIT24477  11 LPPGTRFYPSDEQLICYYLSSKNSADHCNDFQFnlIREIDFYNFDPFNLPdSacfKYGRGGRrrHWFCFVARVLKG-----GRRRAGGGYWKKRGRVRDVM 106
               79*********************999955544334**************953666444444412666666665543.....2445689************* PP

       NAM  94 sk..kgelvglkktLvfykg.rapkgektdWvmheyrl 128
                +  ++ +vg++k++vfy g  +++++ktdW+m ey+l
  OIT24477 107 GEgaGEVVVGTRKSFVFYLGdCTKTAVKTDWLMYEYAL 144
               99777788**********884567789*********87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MGDPNPTSFS LPPGTRFYPS DEQLICYYLS SKNSADHCND FQFNLIREID FYNFDPFNLP  60
DSACFKYGRG GRRRHWFCFV ARVLKGGRRR AGGGYWKKRG RVRDVMGEGA GEVVVGTRKS  120
FVFYLGDCTK TAVKTDWLMY EYALIGNPMA SFVLCRVFIK SHYRNNLSEH VFSSYGEETV  180
AAIRHVGIQC DGTAVSVTES KMHDENTVDP ENDSQALTEP VAEQIGLESG GPPVLNGFSA  240
QELTAILEGD FIELDDLLCP LSAIN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18694GGRRRAGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52890.13e-26NAC family protein