PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT24833
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family GRAS
Protein Properties Length: 415aa    MW: 45882.4 Da    PI: 4.9781
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT24833genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS368.68.6e-113544123374
      GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIl 103
                lLl+cAe+v+ ++l  a +lL ++ el+sp g++ +R+aayf+eAL+ar+ +s  + y+ l+ ++ + ++s++ ++al+ ++ +sP++kfsh taNqaI+
  OIT24833  54 GLLLQCAECVAMENLDDAGNLLPEIAELSSPFGSSAERVAAYFAEALSARIISSHLRFYSPLNLKTLTLTHSQKLFTALQSYNTISPLIKFSHYTANQAIY 154
               58*************************************************************************************************** PP

      GRAS 104 eavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaV 204
               +a+e+e++vH+iD+di+qGlQWp L+q L+sR+++  s++iTgvgs    s e le+tg+rL++fA+++g+pfef++l  k  +  +l++L vk gE+++V
  OIT24833 155 QALESEDHVHVIDLDIMQGLQWPGLFQILSSRSRKLRSVKITGVGS----SMELLESTGRRLTEFANSFGLPFEFKPLEGKIGNITDLSQLGVKMGETIVV 251
               **********************************************....***************************988888888*************** PP

      GRAS 205 nlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaer 305
               n+++  h l+d ++s       + +l+  l+Pk++++veq+++h +++Fl rf+eal+yysalfdsl  +l+ es er++vE++l+g ei+n+va  g +r
  OIT24833 252 NWMH--HCLYDITGSDLG----TFRLLTLLRPKLITIVEQDLSH-GGNFLGRFVEALHYYSALFDSLGDGLSVESVERHTVEQQLFGCEIRNIVAVGGPKR 345
               ***9..777766777777....99********************.789****************************************************8 PP

      GRAS 306 rerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
               + +   +e+W + l++ GF pv+ls + a+qa+lll +++ +gy++ ee+g+l +gWkd +L+++SaW+
  OIT24833 346 TGEVP-VERWGDELKRIGFLPVSLSGTPAAQASLLLGMFP-KGYTLVEENGCLKMGWKDLSLLTASAWQ 412
               87765.9*********************************.9**************************6 PP

Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    
MSSKRSIADF TPVLSDEDAL HLSKRPRSNE EEQFEEGEDQ LPVDTDSVGL RLLGLLLQCA  60
ECVAMENLDD AGNLLPEIAE LSSPFGSSAE RVAAYFAEAL SARIISSHLR FYSPLNLKTL  120
TLTHSQKLFT ALQSYNTISP LIKFSHYTAN QAIYQALESE DHVHVIDLDI MQGLQWPGLF  180
QILSSRSRKL RSVKITGVGS SMELLESTGR RLTEFANSFG LPFEFKPLEG KIGNITDLSQ  240
LGVKMGETIV VNWMHHCLYD ITGSDLGTFR LLTLLRPKLI TIVEQDLSHG GNFLGRFVEA  300
LHYYSALFDS LGDGLSVESV ERHTVEQQLF GCEIRNIVAV GGPKRTGEVP VERWGDELKR  360
IGFLPVSLSG TPAAQASLLL GMFPKGYTLV EENGCLKMGW KDLSLLTASA WQPCD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41920.11e-161GRAS family protein