PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT25391
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 244aa    MW: 28058.2 Da    PI: 10.2306
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT25391genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3505.3e-16137232195
               EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
               f+k+lt +dv  +  l +p kfa+ +     +g+++++++l++ d+ gr W++k    k +++y++++ Wk+ v +++Lk+gD++++ l++++ f  ++k
  OIT25391 137 FEKTLTEKDVEGK--LLIPAKFARYFpktisSGDTRRDVKLQFVDPGGRFWDIKW--VKDGSQYFFRGKWKDIVAEHELKSGDVIMIDLSHDKHFPIRFK 232
               8999999999866..9*******666*****88999*******************..999999**************************99999966665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MTKKSNVDVQ EKAEAKPTSY TGSRMQNLMT PTDEADSFVL ILGHKNVKRR KNINPYYKGD  60
QNMLMYRNSY NVQGGEKEQV MIGDNLMIEN KESVTDAANH SKSSKGSGIK NSFKQMMMRI  120
INRGKPAKEE GRVYSVFEKT LTEKDVEGKL LIPAKFARYF PKTISSGDTR RDVKLQFVDP  180
GGRFWDIKWV KDGSQYFFRG KWKDIVAEHE LKSGDVIMID LSHDKHFPIR FKKQRNILGS  240
CVTE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14551KNVKRRK