PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT25392
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family MYB_related
Protein Properties Length: 211aa    MW: 24022.3 Da    PI: 8.9854
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT25392genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.73e-145498347
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +WT+eE+ l++++ + +G+ +W++I++ +  +Rt  q+ s+ qky
         OIT25392 54 PWTEEEHRLFLKGLEIYGKSNWAKISKDLLPNRTHIQIASHAQKY 98
                     7***************************999*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MARNCTLCGL SGHNQRTCSE KGKSIKLFGV KISTTTSKKD SANNYGRKIK KAIPWTEEEH  60
RLFLKGLEIY GKSNWAKISK DLLPNRTHIQ IASHAQKYFM RLTAASNERK NRKKTSIFDV  120
HLEEMISEEE TSNVSEHTIQ EHAQETGGNI PTSQVPCERA IVPLEIIKEH AQDHQETTAI  180
SSERNHSYNF FIIPCFMPVL NLPVFHSFAI N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.15e-26MYB_related family protein