PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT25522
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 107aa    MW: 12984 Da    PI: 5.9786
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT25522genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B334.83e-11686390
              EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
        B3  3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90
               vl++ ++  ++ + +pk f e+  +    s    + + +g+ W +++  + +++r ++++GWk Fv  n++k g  + F+l++ +ef
  OIT25522  6 EVLMKDSYIMQDYMHIPKYFYEHLPE----SHSTAVLHYDGEPWFMEI--NMGKRR-WFKDGWKYFVMNNNIKRGWLINFELVEITEF 86
              5677888888899********55542....234677888*********..777666.79**********************9865665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    
MNPSFEVLMK DSYIMQDYMH IPKYFYEHLP ESHSTAVLHY DGEPWFMEIN MGKRRWFKDG  60
WKYFVMNNNI KRGWLINFEL VEITEFCVIF QLHVTGRGTL QDPVEIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-06B3 family protein