PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT25744
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 99aa    MW: 11766.8 Da    PI: 10.1091
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT25744genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3361.2e-11990390
              EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS
        B3  3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90
                 +p ++ k++ ++l+kk + ++  ++  s+  tl   +g++W+v+l  ++  +r  l +GWk+Fv +n+L+   +++F+l++  s++
  OIT25744  9 RMKLPRSYIKRDYMYLSKKIC-QYL-PP--STAKTLLRCNGKEWNVTL--TGVVRR-RLVNGWKQFVVDNKLNKWSVLLFELVEAtSSA 90
              4556889999999*******9.673.32..235678899*********..444444.4889********************99764554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    
EEEFYLWFRM KLPRSYIKRD YMYLSKKICQ YLPPSTAKTL LRCNGKEWNV TLTGVVRRRL  60
VNGWKQFVVD NKLNKWSVLL FELVEATSSA VIFVVEVQG