PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT25759
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ZF-HD
Protein Properties Length: 240aa    MW: 27191.4 Da    PI: 6.8961
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT25759genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer104.94.9e-3354107357
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57 
                  k +YkeClkNhA+s+GghavDGCgEf+p+ ge+g+ ++lkCaAC+CHRnFHR+ +
     OIT25759  54 KPKYKECLKNHAVSIGGHAVDGCGEFIPA-GEDGSLDSLKCAACNCHRNFHRKIT 107
                  679*************************9.999*******************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MDFENHQEEE ETEPPPSYDD SLNNSNSTHP TKMPSPTPME LEPLAVVHTW HNNKPKYKEC  60
LKNHAVSIGG HAVDGCGEFI PAGEDGSLDS LKCAACNCHR NFHRKITQPP PTAVEPPPFV  120
NYHLPYYRSL PPPCGYLQYH VAPQQRPLAL PSTSGGGGYR EDQEDMSNLN NSGGGSKKRF  180
RTKFSQEQKE KMQELADKLG WRIQREDEEL VQQLCNETGV RRQVFKVWMH NNKNTLGKKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.18e-68ZF-HD family protein