PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT26165

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

VOZ

Protein Properties

Length: 483aa MW: 53971 Da PI: 6.0383

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT26165	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	412.3	8.8e-127	204	423	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewl...qdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdl 98 pp saflgpkcalwdc+rpa gs+w+ qdycs +ha+la neg pg pv+rp gi+lkd+llf+al ak++gk+vg+pecegaatakspwna+elfdl OIT26165 204 PPASAFLGPKCALWDCPRPAMGSDWCqksQDYCSDYHASLAPNEGYPGRPPVVRPMGIGLKDNLLFQALGAKAHGKDVGVPECEGAATAKSPWNAPELFDL 304 789********************944459****************************************************************** PP VOZ 99 sllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksakgk 199 +++egetirewlffdkprrafesgnrkqrslpdy+grgwhesrkq+m+efgglkrsyymdpqp++++ewhlyeyein++da+alyrlelklvd+kk +kgk OIT26165 305 KVVEGETIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQMMNEFGGLKRSYYMDPQPMKNLEWHLYEYEINKYDACALYRLELKLVDGKKIPKGK 405 ************************************************************************************************* PP VOZ 200 vskdsladlqkklgrlta 217 v++ s++dlqk++grlta OIT26165 406 VTNVSVSDLQKQMGRLTA 423 **************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
MRKVSKRGAC KSASHQLFKD KAKNRVDDLQ GVLTNLQSAR KESRSYDVGL LEEQVHQMLR 60 EWKAELNEPS PASSLQERTN TFGGSLVSSS DIYRLLLGEE EDDATSPLAA PKPEPDAQKV 120 SVTGFQEGFN ATQVLQEQGF HLVDQCKGLP LVVNNAGINN LGIATQLDYH SFDLHQEYDQ 180 QYLPGFDALN LCLEDALPPI HISPPASAFL GPKCALWDCP RPAMGSDWCQ KSQDYCSDYH 240 ASLAPNEGYP GRPPVVRPMG IGLKDNLLFQ ALGAKAHGKD VGVPECEGAA TAKSPWNAPE 300 LFDLKVVEGE TIREWLFFDK PRRAFESGNR KQRSLPDYNG RGWHESRKQM MNEFGGLKRS 360 YYMDPQPMKN LEWHLYEYEI NKYDACALYR LELKLVDGKK IPKGKVTNVS VSDLQKQMGR 420 LTAEFPLDNK RTVKGRAKAA SLKNVGNIQA APIPMLPTCE GFDYGTGEPY DYLVDDLDGY 480 FIT

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

MRKVSKRGAC KSASHQLFKD KAKNRVDDLQ GVLTNLQSAR KESRSYDVGL LEEQVHQMLR  60
EWKAELNEPS PASSLQERTN TFGGSLVSSS DIYRLLLGEE EDDATSPLAA PKPEPDAQKV  120
SVTGFQEGFN ATQVLQEQGF HLVDQCKGLP LVVNNAGINN LGIATQLDYH SFDLHQEYDQ  180
QYLPGFDALN LCLEDALPPI HISPPASAFL GPKCALWDCP RPAMGSDWCQ KSQDYCSDYH  240
ASLAPNEGYP GRPPVVRPMG IGLKDNLLFQ ALGAKAHGKD VGVPECEGAA TAKSPWNAPE  300
LFDLKVVEGE TIREWLFFDK PRRAFESGNR KQRSLPDYNG RGWHESRKQM MNEFGGLKRS  360
YYMDPQPMKN LEWHLYEYEI NKYDACALYR LELKLVDGKK IPKGKVTNVS VSDLQKQMGR  420
LTAEFPLDNK RTVKGRAKAA SLKNVGNIQA APIPMLPTCE GFDYGTGEPY DYLVDDLDGY  480
FIT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	VOZ family protein

Link Out ? help Back to Top
Ensembl	OIT26165