PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT26260
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NF-YB
Protein Properties Length: 175aa    MW: 19730.3 Da    PI: 7.502
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT26260genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB170.22.4e-5336131297
     NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 
               ++q+r+lPianv+rimk++lP nakisk+aket+qecvsefisfvt+easdkc++ekrkt+ngdd++wal++lGf+dyveplk yl+k+relege+
  OIT26260  36 KKQERLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHNEKRKTVNGDDICWALGSLGFDDYVEPLKRYLHKHRELEGER 131
               789******************************************************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MVDNINILGS KYDRESHKSY NYSISGSSSD QDAVIKKQER LLPIANVGRI MKQILPPNAK  60
ISKEAKETMQ ECVSEFISFV TGEASDKCHN EKRKTVNGDD ICWALGSLGF DDYVEPLKRY  120
LHKHRELEGE RVNQNNVGGN NIIEEREREV GLYSSPRVPS ALCPKVQLNH LGRGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.15e-55NF-YB family protein