PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT26375
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 248aa    MW: 27769.9 Da    PI: 5.1849
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT26375genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.22e-18142192255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               +y+GVr ++ +g+++AeIrdp +ng  +r++lg++ tae+Aa a+++a+ +++g
  OIT26375 142 HYRGVRVRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEDAAFAYDKAAFRMRG 192
               8********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MYGIEEYEND YALLESIKCH LLDDWDTTPV TSSDNSTTSI YSRNNSIESN MFPNCLPNEF  60
DNTADTFLHD ILNEGIGYGF EPASDPTILN IKLEPEISVQ SPEVWNFTNF TEFVAPPETA  120
AEMKVEPPVW TRTATAPPKA KHYRGVRVRP WGKFAAEIRD PAKNGARVWL GTYETAEDAA  180
FAYDKAAFRM RGSRALLNFP LRINSGEPDP IRVGSKRLST SPEHSSSSPK KRKQNGSGRY  240
TQLGANQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.11e-49ERF family protein