PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT26378
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family Dof
Protein Properties Length: 224aa    MW: 24320.6 Da    PI: 8.7904
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT26378genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof126.58.2e-401676262
    zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
              ++++lkcprCds ntkfCyynny+lsqPr+fCk+CrryWtkGG+lrn+PvGgg+rkn k+s
  OIT26378 16 EQEHLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGTLRNIPVGGGSRKNTKRS 76
              57899****************************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MQDPSIYTQI KPQFPEQEHL KCPRCDSPNT KFCYYNNYNL SQPRHFCKSC RRYWTKGGTL  60
RNIPVGGGSR KNTKRSSSSS KKISSSTTSS SVLSSKSDQI ANPKPEPFVL PVIPAFDQNS  120
SGVIDMSNGQ FSSLLESNEP QFGNLLEALN PSNNNGSVLQ LGEFARNQNS NSGSGSGSVS  180
DGTRQNGNNT YLGVQNGGDT NNCWNGGSNG WPDLAIYTPG SNFQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51700.15e-37Dof family protein