PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT26569

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 344aa MW: 38842.2 Da PI: 4.6689

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT26569	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.9	4e-53	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeelv +yLk+k+++ ++el evi+ +d+yk++Pw+Lp k + +++ ewyfF++rdkky++g+r+nratk gyWkatgkd++v++ k ++ OIT26569 6 LPPGFRFHPTDEELVGYYLKRKTDELEIEL-EVIPVIDLYKFDPWELPeKsFLPKRDMEWYFFCPRDKKYPNGSRTNRATKCGYWKATGKDRKVVC-KPAV 104 79**************************.99**********95344555788**********************************.9999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg +ktLvfy+grap g +tdWvmheyrl OIT26569 105 VGYRKTLVFYRGRAPLGDRTDWVMHEYRL 133 *************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MGGTSLPPGF RFHPTDEELV GYYLKRKTDE LEIELEVIPV IDLYKFDPWE LPEKSFLPKR 60 DMEWYFFCPR DKKYPNGSRT NRATKCGYWK ATGKDRKVVC KPAVVGYRKT LVFYRGRAPL 120 GDRTDWVMHE YRLCDDVSQG TPSFQGPFAL CRVIKRKDIS SKTSDGRAET TSKQVECSSS 180 NEAFTSAVTS NEPLVLSDDI PSTQNTYVCN DSNYSTPIGS PYQTTQIGES ESAMGTNAAN 240 LWMSQNMILD PSKECLQGQS ISGNYPVYDF PNSTSWQPND QYDFTSSSSF PNFRGDVELS 300 GDLSGYGFAP PFSDEGTYME FYCNEDISYK GYNQSNLLGS PNLF

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MGGTSLPPGF RFHPTDEELV GYYLKRKTDE LEIELEVIPV IDLYKFDPWE LPEKSFLPKR  60
DMEWYFFCPR DKKYPNGSRT NRATKCGYWK ATGKDRKVVC KPAVVGYRKT LVFYRGRAPL  120
GDRTDWVMHE YRLCDDVSQG TPSFQGPFAL CRVIKRKDIS SKTSDGRAET TSKQVECSSS  180
NEAFTSAVTS NEPLVLSDDI PSTQNTYVCN DSNYSTPIGS PYQTTQIGES ESAMGTNAAN  240
LWMSQNMILD PSKECLQGQS ISGNYPVYDF PNSTSWQPND QYDFTSSSSF PNFRGDVELS  300
GDLSGYGFAP PFSDEGTYME FYCNEDISYK GYNQSNLLGS PNLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17980.1	3e-83	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT26569