PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT26671

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 405aa MW: 45722.4 Da PI: 5.284

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT26671	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.4	4.8e-52	32	159	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 l+pGfrFhPtdeelv +yL++k+ +k++++ ++++e+d+yk+ePw+L + ++k+++ ewyfFs+ d+ky +g+r nrat +gyWkatgkd++v + k+++ OIT26671 32 LAPGFRFHPTDEELVRYYLRRKACAKPFRF-QAVSEIDVYKSEPWELAEysSLKTRDLEWYFFSPVDRKYGNGSRLNRATGKGYWKATGKDRPVRH-KSQT 130 579***********************99.88**********84346777888***********************************.999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 +g+kktLvf++grap+g++t+Wvmheyrl OIT26671 131 IGMKKTLVFHSGRAPDGKRTNWVMHEYRL 159 ***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MEQEGALVIV PAAVPVTTAT PKRAVAPPPT SLAPGFRFHP TDEELVRYYL RRKACAKPFR 60 FQAVSEIDVY KSEPWELAEY SSLKTRDLEW YFFSPVDRKY GNGSRLNRAT GKGYWKATGK 120 DRPVRHKSQT IGMKKTLVFH SGRAPDGKRT NWVMHEYRLT DEELERAGVV QDAFVLCRIF 180 QKSGLGPPNG DRYAPFIEEE WDDDTALLVP GGETEDDVVN GDEARVEGND LDQDARHKAP 240 PRQSENLLEP QPIPFICKRE RSPEDPEPLS LAQSKRSKRE DPSSSHANGS EDSTTSQQDP 300 PTTMMTTNYS PPSLLAFPLL EPLEPKESQP SNPPTFDSSN LEKSVPPGYL KFISNLENEI 360 LNVSMERETL KIEVMRAQAM INILQSRIDL LNKENEDLRR LVRGG

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MEQEGALVIV PAAVPVTTAT PKRAVAPPPT SLAPGFRFHP TDEELVRYYL RRKACAKPFR  60
FQAVSEIDVY KSEPWELAEY SSLKTRDLEW YFFSPVDRKY GNGSRLNRAT GKGYWKATGK  120
DRPVRHKSQT IGMKKTLVFH SGRAPDGKRT NWVMHEYRLT DEELERAGVV QDAFVLCRIF  180
QKSGLGPPNG DRYAPFIEEE WDDDTALLVP GGETEDDVVN GDEARVEGND LDQDARHKAP  240
PRQSENLLEP QPIPFICKRE RSPEDPEPLS LAQSKRSKRE DPSSSHANGS EDSTTSQQDP  300
PTTMMTTNYS PPSLLAFPLL EPLEPKESQP SNPPTFDSSN LEKSVPPGYL KFISNLENEI  360
LNVSMERETL KIEVMRAQAM INILQSRIDL LNKENEDLRR LVRGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.2	1e-107	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT26671