PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT26684

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bHLH

Protein Properties

Length: 258aa MW: 29612.9 Da PI: 8.7739

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT26684	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.1	5.6e-12	88	140	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 rr h +Er+RR+++ ++ Lr+llP ++K s ++ +Av+YIk++q OIT26684 88 RRIIHRDIERQRRREMSALYSSLRSLLPLqY---VKGKRSVSDHMHEAVNYIKEMQ 140 6888***********************66...9*****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 258 aa Download sequence
MYSLQENDEL VFQILSNPCQ QSKVSQDLVM DYASLETRTH HDPLNIYNSQ VNKRLPKRIL 60 GTTDNNIPDH KKDETAAAPA PPDDFKLRRI IHRDIERQRR REMSALYSSL RSLLPLQYVK 120 GKRSVSDHMH EAVNYIKEMQ ANIKELEKRR ELLIKSSLPN SIRNGNYRSN NFTDCVTVSP 180 CLQGGIEILI SVDCKAQSFP LSRVLRELLK QGINAVSCVS AKVNQRSLYT IQIEVCDMNK 240 IDHQALQQKV IDLINVDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51790.1	2e-40	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIT26684