PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT26699
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 196aa    MW: 21139.6 Da    PI: 4.995
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT26699genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.12.2e-182677155
       AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
              + y+G+r++k++g+Wv+eIr+p     r   r++lg+f tae+Aa a++ a+ +l+g
  OIT26699 26 PVYRGIRRRKSSGKWVSEIREP-----RspNRIWLGTFPTAEMAAVAYDVAAIALKG 77
              68*******************9.....4489**********************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MATYGGSSTN IGGSATAPNN YSGRHPVYRG IRRRKSSGKW VSEIREPRSP NRIWLGTFPT  60
AEMAAVAYDV AAIALKGRDT DLNFPNSAAS LPVPATSSPR DIQAAAASAA AAVGAAGDAI  120
LARREVHDQK SKLVSENLGF ENNYEFMDED LIFDMPNVLV NMAEGMLLSP PRFNLPDDDI  180
AAAAEYTAYQ NLWNYP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.15e-45ERF family protein