PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT26828

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 1020aa MW: 111300 Da PI: 5.0479

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT26828	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	26.8	1.4e-08	797	861	65	128
NAM 65 dkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128 +k+++t k +r++ +g+Wk + k +ev++ kg+l+g ++L + +++++ ++ +W+m ey+l OIT26828 797 QKEKPTWKGVSRTVGKGTWKPQNKGREVFDDKGRLMGYVESLKYIpANKSSNNVNGKWLMTEYSL 861 45566777889999*****************************656888889*******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1020 aa Download sequence
MAAEVADETS TFFVAVHVGA GYHAPSNEKA LRSVMKRACL AADSVLRKGP GGCIDAVTAA 60 IQVLEDDPNT NAGRGSNLTE DGHVECDASI MDGDSGTFGA VGAVPGVRNS IQIAALLVKE 120 QMSGSPLLGR ISPMFLVGEG ARTWAMSRGI VSPSTVSEAE EWLVTERART QWKRYKGMLD 180 DAKDVNDASA TKMAHPKDSG TVSARVYELK TKVTAMKQGA RSVTEYANLL QGLWQEIDHY 240 QCIQMRCPED AVTLKRFIER ERTYDFLAGL NVELDPVWVQ ILGKEELPSL DEAVSIVRAE 300 EGHKSVMLDT QAREGSALVA KGAGQKENSM LQPSDNSTQP TNASKLFNRD SLYCIYCKKH 360 RHTRERCWKL NGKPQNNNHR GENGRQAYVA STHQNDLDNS AKSNPEISQE DIERLKGLLS 420 SLDKSNPAET ESESFFSTSY LQGETKNEDS PKDVFILDIA ESSKNEVTVE SPGPIEPSVE 480 TPDPTESPDH QNEERTQSDI QPPLQVYSRR KERVHPPAQA QSSNLAPVPS SEYVPESLNN 540 QEQPSDQVDD LNLPIALRKG TRNYTPEVDN QSRGNGGRNQ ISILGALDED FISDTVGVIC 600 VDTEGHIACG SSSGGIALKV GGRVGLAAMY GSGCWASSKG PFGAPFIVGC CVSGSGEHLM 660 RGFAARECCV SSALSQAGPS SACKKVLQSA VRENSQCGTE SSAGFLLVQA ESPRMIAGGL 720 ARMDAVEIAA VYSSSSFGIG YFGSSMERPK VSVLRSTKKH GKTAIGITLN LFDMSKASSL 780 GKCRGSKVAF KCRLEFQKEK PTWKGVSRTV GKGTWKPQNK GREVFDDKGR LMGYVESLKY 840 IPANKSSNNV NGKWLMTEYS LFDRYLAARE IKNKGFVICK IKKKGRPGDK KKGNNIDEVV 900 NDENMRDIEE FINTVLKEDV QVEDNGIRSN GIAKDDQENN IIQYVEGDQV RDHVLSLLGS 960 PEDIVDADDH EENVEDCIDQ GDEFQVHLLE EYIDSVMQSE DVQAEDNGMM SSNDINYSKG

Sequence ? help Back to Top

Protein Sequence Length: 1020 aa Download sequence

MAAEVADETS TFFVAVHVGA GYHAPSNEKA LRSVMKRACL AADSVLRKGP GGCIDAVTAA  60
IQVLEDDPNT NAGRGSNLTE DGHVECDASI MDGDSGTFGA VGAVPGVRNS IQIAALLVKE  120
QMSGSPLLGR ISPMFLVGEG ARTWAMSRGI VSPSTVSEAE EWLVTERART QWKRYKGMLD  180
DAKDVNDASA TKMAHPKDSG TVSARVYELK TKVTAMKQGA RSVTEYANLL QGLWQEIDHY  240
QCIQMRCPED AVTLKRFIER ERTYDFLAGL NVELDPVWVQ ILGKEELPSL DEAVSIVRAE  300
EGHKSVMLDT QAREGSALVA KGAGQKENSM LQPSDNSTQP TNASKLFNRD SLYCIYCKKH  360
RHTRERCWKL NGKPQNNNHR GENGRQAYVA STHQNDLDNS AKSNPEISQE DIERLKGLLS  420
SLDKSNPAET ESESFFSTSY LQGETKNEDS PKDVFILDIA ESSKNEVTVE SPGPIEPSVE  480
TPDPTESPDH QNEERTQSDI QPPLQVYSRR KERVHPPAQA QSSNLAPVPS SEYVPESLNN  540
QEQPSDQVDD LNLPIALRKG TRNYTPEVDN QSRGNGGRNQ ISILGALDED FISDTVGVIC  600
VDTEGHIACG SSSGGIALKV GGRVGLAAMY GSGCWASSKG PFGAPFIVGC CVSGSGEHLM  660
RGFAARECCV SSALSQAGPS SACKKVLQSA VRENSQCGTE SSAGFLLVQA ESPRMIAGGL  720
ARMDAVEIAA VYSSSSFGIG YFGSSMERPK VSVLRSTKKH GKTAIGITLN LFDMSKASSL  780
GKCRGSKVAF KCRLEFQKEK PTWKGVSRTV GKGTWKPQNK GREVFDDKGR LMGYVESLKY  840
IPANKSSNNV NGKWLMTEYS LFDRYLAARE IKNKGFVICK IKKKGRPGDK KKGNNIDEVV  900
NDENMRDIEE FINTVLKEDV QVEDNGIRSN GIAKDDQENN IIQYVEGDQV RDHVLSLLGS  960
PEDIVDADDH EENVEDCIDQ GDEFQVHLLE EYIDSVMQSE DVQAEDNGMM SSNDINYSKG

Link Out ? help Back to Top
Ensembl	OIT26828