PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT26945
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 117aa    MW: 13545.2 Da    PI: 5.8704
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT26945genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY253.7e-0888103217
               --SS-EEEEEEE--TT CS
      WRKY   2 dDgynWrKYGqKevkg 17 
               dDgy+WrKYGqK++ g
  OIT26945  88 DDGYSWRKYGQKDILG 103
               8************977 PP
Sequence ? help Back to Top
Protein Sequence    Length: 117 aa     Download sequence    
MQIILSSFEN SLSILKWTDS ITQTQQIVVA PPPSISVDEI STKTDDLNGN FKDNDQDLRY  60
VSKKRKQLPT WTEQVRVSAE NGFEGPTDDG YSWRKYGQKD ILGYCNFVWT KRHSWLL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15866LRYVSKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.19e-22WRKY family protein