PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT26979
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 152aa    MW: 17453.5 Da    PI: 9.5176
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT26979genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.22.3e-192677256
       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
              +y+GVr+++ +g+++AeIrdp+ +g  +r +lg+f+tae+Aa+a+++ + +l+g+
  OIT26979 26 KYRGVRRRP-WGKFAAEIRDPTRQG--ARQWLGTFDTAEDAARAYDKTAFNLRGH 77
              8********.**********96544..**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    
MEGSSSKGKK AMQEKESGNK GKEEIKYRGV RRRPWGKFAA EIRDPTRQGA RQWLGTFDTA  60
EDAARAYDKT AFNLRGHLAT LNFPNEYYSQ LSNPPYHYRT TSFNIINPIR RGLEKGNSSI  120
GNQDKEIIEF EYLDDSVLEE LLGSEEPKMT RK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.13e-48ERF family protein