PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT27076
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 205aa    MW: 23117.3 Da    PI: 8.3474
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT27076genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.67.7e-19554154
       AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkle 54
              ++++GVr+++ +g+Wv+eIr+p        +r++lg+f+taeeAa+ +++a+  + 
  OIT27076  5 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFDTAEEAARVYDQAAILMS 54
              59*******9.**********8.....334*********************98776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MVHSKKFRGV RQRHWGSWVS EIRHPLLKRR VWLGTFDTAE EAARVYDQAA ILMSGRNAKT  60
NFPITQDSDN KELKAKDQEF SSIPSPKALS EILHAKLRKC TKVPSPSLTC LRLDIESSHI  120
GVWQKRAGPS SDSKWVMTVE LQKKNNVNAT IEGELNSSST SSSKNCGEIV EGISIRSEMD  180
EEERVALQMI EELLHINSPC PTFDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.16e-74ERF family protein