PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT27149
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family MYB_related
Protein Properties Length: 95aa    MW: 10941.3 Da    PI: 9.7336
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT27149genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.72.6e-08449345
                     SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwq 45
                     +WTt   +++ +a  ++ +g    +   Ia+++g g++ ++++ ++ 
         OIT27149  4 NWTTKQNKRFEEALVMYDKGtsseRLQNIAKYVG-GKSVEEVRRHYE 49
                     8*********************************.**********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 95 aa     Download sequence    
MATNWTTKQN KRFEEALVMY DKGTSSERLQ NIAKYVGGKS VEEVRRHYEL LVKDITQIEN  60
GQVPLPNYRT NTAPETNARG GYPNEQRLLK NLSLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.18e-31MYB_related family protein