PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT27200
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 223aa    MW: 24802.2 Da    PI: 4.395
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT27200genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.21e-182171155
       AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
              s+y+GVr +k +g+Wv+e+r p++   r r++lg+++t+e+Aa+a +aa  +l+g
  OIT27200 21 SKYRGVRKRK-WGKWVSEVRLPNS---RERIWLGSYDTPEKAARAFDAALFCLRG 71
              89*****999.*******999833...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MVKPNGKDSC ENSPSSSSSS SKYRGVRKRK WGKWVSEVRL PNSRERIWLG SYDTPEKAAR  60
AFDAALFCLR GKTANFNFPE NPPEIVNGRS MTPAEIQVAA AQFANSYSEP RVSNWVNPRD  120
NSDPSSSSSE MFNAESPSVS VSNGLVGLES EKTEMTLDNG FVDMFSSMGT ANDMSDFGIF  180
PGFDDLSGEY YVPPLPNLDN TAEENYMNYD EFHLQGSSFL WNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.16e-62ERF family protein