PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT27216
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family Dof
Protein Properties Length: 250aa    MW: 27740.9 Da    PI: 7.702
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT27216genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof122.61.3e-3847108263
    zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 
               k++al+cprC+s+ntkfCyynnyslsqPryfCk+C+ryWt+GG+lr +PvGgg+rk+kksss
  OIT27216  47 KDQALNCPRCNSKNTKFCYYNNYSLSQPRYFCKTCKRYWTEGGSLRSIPVGGGSRKSKKSSS 108
               7899******************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MDTAQWPQEI VVKPMEEIIP KNTNTITTIC SSKPSTHIER KIKPHQKDQA LNCPRCNSKN  60
TKFCYYNNYS LSQPRYFCKT CKRYWTEGGS LRSIPVGGGS RKSKKSSSST NSSSSNSMSR  120
ELSKNIVAPV LNPPKMEGSQ DLNLGFSCDF KNISELIQVP NNSFMPMPIS DPNSVYSSLN  180
FSLDYGLGIS GDYENNLQDV QDSTTSGRLL FPFEDLKQVS NTSIDGPEEN RDGESNGYWN  240
AVLGGNGGSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64620.13e-43Dof family protein