PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT27323
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 217aa    MW: 24416.7 Da    PI: 6.283
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT27323genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.92.1e-1758108155
       AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               + y+GVr +  +g+Wv+e+r+p   +k+ r++lg+f  ae+Aa+a++ a+ +l+g
  OIT27323  58 PVYRGVRKRN-SGKWVCEVREP---NKKSRIWLGTFPCAEMAARAHDVAAIALRG 108
               68*****888.8******9998...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MDIFRSYYSD PLAEYSSISD TRRSSCMRAN LSDEEVMLAS NNPKKRAGRK KFRETRHPVY  60
RGVRKRNSGK WVCEVREPNK KSRIWLGTFP CAEMAARAHD VAAIALRGRS ACLNFADSAW  120
RLPIPASSDA KDIQKAAAEA AEAFRSSEAE NMPEYSGENS KETPENMFYM DEEALFCMPG  180
LLANMAEGLM LPPPQCSQIG DHMELADVDM PLWSYSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.11e-73ERF family protein