PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT27382
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family MYB_related
Protein Properties Length: 106aa    MW: 12265.8 Da    PI: 5.0128
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT27382genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.62.6e-122668145
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     ++ +++eE+ l+++ +++ G++ W++Ia +++ gRt++++  +w+
         OIT27382 26 KLEFSEEEEMLIAKMFNLVGKR-WSLIAGRIP-GRTPEEIEKYWN 68
                     678*******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    
MADELSSTSD NTFLVSAETT TEETSKLEFS EEEEMLIAKM FNLVGKRWSL IAGRIPGRTP  60
EEIEKYWNSR YVNHKPEKRL KISSSINEER RKLETTSRNL ETLPAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46410.12e-15MYB_related family protein