PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT27595
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family MYB_related
Protein Properties Length: 191aa    MW: 21092.3 Da    PI: 10.4543
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT27595genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.91.3e-14109153347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
         OIT27595 109 PWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 153
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MSRSSSQSGT NGHNSFTSAG ESSPAAVSGG GGEIMLFGVR VKVDPMRKSV SLNNLSQYEL  60
PNGSDNINNN SNSGNNNESS KVADEGYASA DDAVPHHSVS GRERKRGVPW TEEEHKLFLL  120
GLQKVGKGDW RGISRNFVKT RTPTQVASHA QKYFLRRTNL NRRRRRSSLF DITTDSVCNS  180
LYHKFHLLPI E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19000.13e-54MYB_related family protein