PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT27605
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NF-YB
Protein Properties Length: 131aa    MW: 14832.5 Da    PI: 4.8592
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT27605genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB151.91.2e-47599397
     NF-YB  3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97
              e+ +++Pianv+rimk++lP  akisk+aket+qec+sefisfvt+easdkc++e+r+t+ngdd++wal++lGf++y+e++  yl k re+e+++
  OIT27605  5 EHVKLVPIANVGRIMKQILPPTAKISKEAKETIQECASEFISFVTGEASDKCHKENRRTVNGDDICWALSSLGFDNYAEAMLRYLYKLREFERQR 99
              67789***************************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    
MDVNEHVKLV PIANVGRIMK QILPPTAKIS KEAKETIQEC ASEFISFVTG EASDKCHKEN  60
RRTVNGDDIC WALSSLGFDN YAEAMLRYLY KLREFERQRA NQTKGSNDED TDHEAASESE  120
NQEIITTPPA R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09030.11e-55NF-YB family protein