PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT27632
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 157aa    MW: 17713.7 Da    PI: 9.7416
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT27632genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.68.3e-202778256
       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56
              +y+GVr+++ +g+++AeIrdp     r   r +lg+f+taeeAa+a+++a+ +l+g+
  OIT27632 27 KYRGVRRRP-WGKFAAEIRDPA----RpsSRQWLGTFDTAEEAARAYDRAAFNLRGH 78
              8********.**********83....4669*************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MEGNSSRGKK AMQEKEGSNN KGKEEVKYRG VRRRPWGKFA AEIRDPARPS SRQWLGTFDT  60
AEEAARAYDR AAFNLRGHLA TLNFPNEYYN QLQYPPLYYR NSFSSPTNVA SNPRGSLENG  120
NSSSSTGKAK EIIELECLDN SVLEELLGAE DSKMKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.17e-30ERF family protein