PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT27634
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 241aa    MW: 27162.3 Da    PI: 5.7632
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT27634genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.9e-1892142255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                ++GVr+++ +g+++AeIrd + ng   r++lg+f+++e Aa a+++a+ +++g
  OIT27634  92 SFRGVRRRP-WGKFAAEIRDSTRNG--VRVWLGTFDSPEAAALAYDQAAFSMRG 142
               59*******.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MDSSSCSSHF FYPMNSDLSS DSSWEWSNLN STNSLPFNLN DSEEMLLFGV LTNTAQETTS  60
ETVTSYHVKE EEVSSRSKVI KEIEEKPAKE KSFRGVRRRP WGKFAAEIRD STRNGVRVWL  120
GTFDSPEAAA LAYDQAAFSM RGTSAILNFP VETVQESLRD MKCHVDKDCS PVVALKKRHS  180
MRKRSLNSKK ISNSNSKVVR EVKMENVNVV VFEDLGADYL EQLLSSSSSD QSSCNEAFLP  240
W
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.12e-64ERF family protein