PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT27661
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 253aa    MW: 28612.9 Da    PI: 7.7
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT27661genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.59.3e-20129178356
       AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56 
               y+GVr+++ +g+W+AeIrdp     +  +r++lg+f taeeAa+a+++ + +++ge
  OIT27661 129 YRGVRQRP-WGKWAAEIRDP-----HkaQRVWLGTFITAEEAARAYDKKAIEFRGE 178
               9*******.**********7.....337*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MSNIHYLEFQ DNRFSQESQL QDNKKCSITH KLTQDQEFYF MVSALRHVIS GADGKTDGEA  60
AQLLREVENA SAATSASILP RRSTVEPTVS ATTYLACHIG NTTTSFHVKR ENLELQKGRR  120
RRRNTKKEYR GVRQRPWGKW AAEIRDPHKA QRVWLGTFIT AEEAARAYDK KAIEFRGEKA  180
KTNFPISEYA AAATTVTGHN NKLPMVVEEL QVQNGVTVAG DDNGESSMQN GDDFWDTLED  240
DGLVKWITKD MSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33710.11e-30ERF family protein