PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT27875
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 223aa    MW: 25423.5 Da    PI: 10.443
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT27875genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM92.28.7e-29171561128
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk....sgyWkatgkdkevlsk. 95 
               lp GfrF+Ptdeel+v+yL +k+ + +l++  +i+e+ d++ + P+dLp+     +++ yfFsk++   ++ k  +r ++    sgyWka g+ + +++  
  OIT27875  17 LPIGFRFRPTDEELLVHYLSRKIFSMPLPA-LIIPEIlDVFVSFPSDLPA--GDLRENRYFFSKANGDINS-KGCSRLISgkdcSGYWKAVGQGQLIVVPi 113
               699**************************9.5688888***********3..3345678****99887754.4445532224569************9998 PP

       NAM  96 .......kgel.....vglkktLvfykgrapkgektdWvmheyrl 128
                      +  +      g+kk L fy+ ++++  +t+W+mh+y+l
  OIT27875 114 sgsavseQ--QqqrllLGMKKALRFYQTTRSECLRTRWIMHQYSL 156
               88887651..135677***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MEKQKKGAKP TVGSLNLPIG FRFRPTDEEL LVHYLSRKIF SMPLPALIIP EILDVFVSFP  60
SDLPAGDLRE NRYFFSKANG DINSKGCSRL ISGKDCSGYW KAVGQGQLIV VPISGSAVSE  120
QQQQRLLLGM KKALRFYQTT RSECLRTRWI MHQYSLVTIS SSDQNVNMMQ VGDWSVFRIY  180
QKKLLISKNL RTKSNGFAEQ CNIKTNTRKR PFNEVLKDKE VPI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.12e-32NAC family protein