PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT27884
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 99aa    MW: 11678.7 Da    PI: 9.1129
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT27884genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B333.57.2e-11474986
              HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
        B3  9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86
              ++ k++ l + k f e++    e + t ++ +  g++W + l  + + +r +l++GWk+Fv  n++k g  v F+l++
  OIT27884  4 SYIKQDYLHILKCFYEHIP---EAH-TTVVLQYGGKEWFMGL--NVGERR-WLKDGWKKFVMKNDIKRGCLVKFELVE 74
              5667788999999996664...334.5566677*********..777766.8***********************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    
LKDSYIKQDY LHILKCFYEH IPEAHTTVVL QYGGKEWFMG LNVGERRWLK DGWKKFVMKN  60
DIKRGCLVKF ELVEIAQILL VFKVKVKGQG THEDPVEIN