PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT28047
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family GeBP
Protein Properties Length: 226aa    MW: 26074.8 Da    PI: 10.0164
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT28047genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57330.88.3e-10711154897
    DUF573  48 kvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
               +++++q+ +K++rLK+K++k  +      +  ++++hd+ki+e++++iWg
  OIT28047  71 NFTEKQIAKKLKRLKEKYHKLARS-----KSLIKTPHDKKIYEIARQIWG 115
               6899***************99988.....6789****************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MTTPPRRKRN PTSAANHREN SPKSPEKSIP ITKTLSKTPE AHRVFTENDE IQLLKTISGS  60
PNNSEFTSNG NFTEKQIAKK LKRLKEKYHK LARSKSLIKT PHDKKIYEIA RQIWGRNAAK  120
GKEPGVELHR SCEEEKGAEV EVEVEEEVNL EEFPFLVSEM MSIFGRSEYC KEGLRRLGKE  180
KLKRMNEKWM ELRLKEAEIM VNKAKLYHEQ LKLVVEGSKG TDNEAN