PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT28079
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 175aa    MW: 19525.8 Da    PI: 7.709
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT28079genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.87.4e-201665255
       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
              +ykGVr +k +g+WvAe+r p++   r r++lg+++taeeAa+a++aa  +l+g
  OIT28079 16 RYKGVRMRK-WGKWVAEVRQPKS---RDRIWLGSYDTAEEAARAYDAAVVCLRG 65
              69*****99.*******999854...4*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MVRPKGNKEK KDNGDRYKGV RMRKWGKWVA EVRQPKSRDR IWLGSYDTAE EAARAYDAAV  60
VCLRGPSATI NFPNDPPLIP SSGPNCDQQQ LSPSQIQVAA SRHARRVCES AVVDSRLPAV  120
ETVFFRDNNS EFGCSSYVDC YNLAITDKSS TGDGEVLHDD LFDSCFYGSN PCRQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G21960.11e-26ERF family protein