PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT28167

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

TALE

Protein Properties

Length: 594aa MW: 66141.3 Da PI: 6.8255

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT28167	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.4	2.8e-09	386	418	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yp+ +++ LAk++gL+ +qV++WF N R + OIT28167 386 HPYPTDSDKVMLAKQTGLSRNQVSNWFINARVR 418 89*****************************88 PP
2	BELL	96.4	2.4e-31	248	317	3	72
BELL 3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+++ k+ L+s+l+eV++rYkqy++qlq+v++sFe v glg+a+p+++l lka+S+hFrcLk+ai++q+ OIT28167 248 SEHRRNKSNLISMLNEVYRRYKQYYQQLQAVVASFESVHGLGNAAPFAKLSLKALSKHFRCLKNAITDQL 317 78999**************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 594 aa Download sequence
MAEGFEAYHV PQQSRRDRLR VSASGLLPFV DHPSLIPSDF LLVSDSKEKG VNFMDPQLSS 60 GVSFQEINGN PFLYSHQNFR FLDQSFHGGD VDVAYKQEPF SLVAASPETN IIINNNNNCN 120 NNVTTGQGLS LSLSSSHHNH HYNNQSNSSS NLPLELNLQR YDSSIFTNDM SSKSSSATVP 180 LGPFTGYASI LKGSRFLKPA QQLLEELCDV GREIYAEKLA ANDGFVVMDP SLEATLSDDP 240 QYSCGDASEH RRNKSNLISM LNEVYRRYKQ YYQQLQAVVA SFESVHGLGN AAPFAKLSLK 300 ALSKHFRCLK NAITDQLQYT GKSQNCESDH SIPRAGNPAG KGIYCQRTAI HNAGFVDHQP 360 VWRPQRGLPE RAVIVLRAWL FDHFLHPYPT DSDKVMLAKQ TGLSRNQVSN WFINARVRLW 420 KPMVEEIHNL ETRQAQKAAL QREEQNNNNN PIEHFPTSNS LASEHPSTSS QQFQDIPSKR 480 TRNNDPSETH LVGDDQETMN LSYDNFSPHS RAGVVDQMST ASAGNGGVSL TLGLKQNNNV 540 SIGLSGSFPR NAARRFGIDE NNEGFMFGGF ETQNRQFGRD NNIIGGQLLH DFVG

Sequence ? help Back to Top

Protein Sequence Length: 594 aa Download sequence

MAEGFEAYHV PQQSRRDRLR VSASGLLPFV DHPSLIPSDF LLVSDSKEKG VNFMDPQLSS  60
GVSFQEINGN PFLYSHQNFR FLDQSFHGGD VDVAYKQEPF SLVAASPETN IIINNNNNCN  120
NNVTTGQGLS LSLSSSHHNH HYNNQSNSSS NLPLELNLQR YDSSIFTNDM SSKSSSATVP  180
LGPFTGYASI LKGSRFLKPA QQLLEELCDV GREIYAEKLA ANDGFVVMDP SLEATLSDDP  240
QYSCGDASEH RRNKSNLISM LNEVYRRYKQ YYQQLQAVVA SFESVHGLGN AAPFAKLSLK  300
ALSKHFRCLK NAITDQLQYT GKSQNCESDH SIPRAGNPAG KGIYCQRTAI HNAGFVDHQP  360
VWRPQRGLPE RAVIVLRAWL FDHFLHPYPT DSDKVMLAKQ TGLSRNQVSN WFINARVRLW  420
KPMVEEIHNL ETRQAQKAAL QREEQNNNNN PIEHFPTSNS LASEHPSTSS QQFQDIPSKR  480
TRNNDPSETH LVGDDQETMN LSYDNFSPHS RAGVVDQMST ASAGNGGVSL TLGLKQNNNV  540
SIGLSGSFPR NAARRFGIDE NNEGFMFGGF ETQNRQFGRD NNIIGGQLLH DFVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	1e-102	TALE family protein

Link Out ? help Back to Top
Ensembl	OIT28167