PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT28306

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 541aa MW: 60398.6 Da PI: 4.5573

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT28306	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.3	2.5e-52	10	137	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 l+pGfrFhPtdeelv +yL++k+ gk+l++ ++i+e+diykvePwdLp +++k+++ ewyfFs dkk+ +g ++nrat++gyWk+tgkd++v++ k+++ OIT28306 10 LAPGFRFHPTDEELVRYYLRRKIIGKPLRF-DAISEIDIYKVEPWDLPgmSRLKTRDLEWYFFSMLDKKHGNGAKTNRATERGYWKTTGKDRAVHH-KSKV 108 579***********************99.99***********6347788888***********************************.999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg+kktLv++ grapkg++t+Wvmhey+l OIT28306 109 VGMKKTLVYHIGRAPKGQRTNWVMHEYKL 137 ***************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 541 aa Download sequence
MESRRSKNLL APGFRFHPTD EELVRYYLRR KIIGKPLRFD AISEIDIYKV EPWDLPGMSR 60 LKTRDLEWYF FSMLDKKHGN GAKTNRATER GYWKTTGKDR AVHHKSKVVG MKKTLVYHIG 120 RAPKGQRTNW VMHEYKLIDE ELDKAGIAQD AFVLCRIFQK SGAGPKNGEK YGAPFVEEEW 180 EDDELEIVPK EEAVDEVEFG DDIYLDGHDL EQILGTDKPV DGAPPPFNRY CEENASNSGG 240 TSNSFEDTEK WLQPPEQESF DPAIEENANV NPVKHEFMSE PSKNVNSEDV DYLLNEPIET 300 ATDTLQFNDG AFLEASDLSR PIDTSSFDML EEYLTFFDAD NDFQNMGFNP PMMIGGDDHV 360 SDLASLADKN IGEVADQPIA PSEEPADQKA NVASSSKLEP SKFGSDYKYP FMKQASCMLG 420 GIPAPPAFAS EFPSKDAAFR MNSSSEASSS IHVTAGYIQI RNMTMSGNGT DGLVGKHGNY 480 NILLSFGLSQ HADCAASLES VVSILPGKTI STASCWFYYL FSWVLILSMS FKIGTLIRAS 540 A

Sequence ? help Back to Top

Protein Sequence Length: 541 aa Download sequence

MESRRSKNLL APGFRFHPTD EELVRYYLRR KIIGKPLRFD AISEIDIYKV EPWDLPGMSR  60
LKTRDLEWYF FSMLDKKHGN GAKTNRATER GYWKTTGKDR AVHHKSKVVG MKKTLVYHIG  120
RAPKGQRTNW VMHEYKLIDE ELDKAGIAQD AFVLCRIFQK SGAGPKNGEK YGAPFVEEEW  180
EDDELEIVPK EEAVDEVEFG DDIYLDGHDL EQILGTDKPV DGAPPPFNRY CEENASNSGG  240
TSNSFEDTEK WLQPPEQESF DPAIEENANV NPVKHEFMSE PSKNVNSEDV DYLLNEPIET  300
ATDTLQFNDG AFLEASDLSR PIDTSSFDML EEYLTFFDAD NDFQNMGFNP PMMIGGDDHV  360
SDLASLADKN IGEVADQPIA PSEEPADQKA NVASSSKLEP SKFGSDYKYP FMKQASCMLG  420
GIPAPPAFAS EFPSKDAAFR MNSSSEASSS IHVTAGYIQI RNMTMSGNGT DGLVGKHGNY  480
NILLSFGLSQ HADCAASLES VVSILPGKTI STASCWFYYL FSWVLILSMS FKIGTLIRAS  540
A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	1e-133	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT28306