PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT28648
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family G2-like
Protein Properties Length: 90aa    MW: 10360 Da    PI: 10.622
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT28648genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like62.86.7e-202369856
   G2-like  8 peLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
              +++ +r +e+v++L G+++ +Pkti++lm+v+gLt+e+v+SHLQkYRl+
  OIT28648 23 KTINHR-IEVVAHL-GIKNVVPKTIMQLMNVEGLTRENVASHLQKYRLY 69
              555444.89*****.9*******************************85 PP
2Myb_DNA-binding26.61.4e-0829671348
                     HHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 13 vdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48
                     +++v+ lG +   +ktI++ m+ +g+t++++ s++qky+
         OIT28648 29 IEVVAHLGIKnvVPKTIMQLMNvEGLTRENVASHLQKYR 67
                     5789999999999*************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    
MVPEPRSLPE QKQPPIRPPQ WQKTINHRIE VVAHLGIKNV VPKTIMQLMN VEGLTRENVA  60
SHLQKYRLYM KRHGNEGPSS FDNLLNSTPV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46640.32e-29G2-like family protein