PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT28663
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 269aa    MW: 30725.9 Da    PI: 6.4061
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT28663genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.14.3e-1890139255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                y+GVr ++ +g+Wv+eIr+p++   + r++lg++ ta++Aa+a++ a+++++g
  OIT28663  90 TYRGVRKRS-WGKWVSEIREPRK---KSRIWLGTYPTAQMAARAHDVAALAIKG 139
               69****888.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MEDQEQRINL ETRANYHRHD FFSNSACNVL NSPLTTTSSS SSSSSFSSSN ELTRKDYDSK  60
KSSRKDQELI QIYENGEEKK KNEDDNKHPT YRGVRKRSWG KWVSEIREPR KKSRIWLGTY  120
PTAQMAARAH DVAALAIKGN SAYLNYPHLA HQLPRPASAS PKDIQTAAAK AAAITFPDKN  180
EEIRAKPSRV ELRSCHSSTN LFLENTQEEL PNSLSREDDD TFFDLPDLSI DVVDQNDRYW  240
CTMSTWQQLV GADTTGFRLE EPFLWECPG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.17e-55ERF family protein