PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT28970
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NF-YB
Protein Properties Length: 167aa    MW: 18733.8 Da    PI: 6.2258
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT28970genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB137.44.1e-431791795
     NF-YB 17 mkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95
              m+k+lP +akis+d ket+qecvsefisfvt+ea+d+cqre+rkti+++d+lwa+++lGf+dy+epl++yl++yre +g
  OIT28970  1 MRKILPPHAKISDDGKETIQECVSEFISFVTGEANDRCQREQRKTITAEDVLWAMSKLGFDDYIEPLTIYLHRYREYDG 79
              89**************************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MRKILPPHAK ISDDGKETIQ ECVSEFISFV TGEANDRCQR EQRKTITAED VLWAMSKLGF  60
DDYIEPLTIY LHRYREYDGG ERGSLRGEPL LIKSRAMIDP ATSTSVAMAP YPVPHNFAMA  120
HHHHHGYFAY APMSNGYMQN HDNNGSTSQA AAANGEANVQ SYAENKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47670.25e-51NF-YB family protein