PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT28996
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 327aa    MW: 36728.3 Da    PI: 9.0848
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT28996genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM175.41.6e-54121391128
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelv 100
               lppGfrFhPtdeel+++yL +k+++ +++  ++i++vd++k+ePwdLp k+k + kewyfFs rd+ky+tg r+nrat++gyWk+tgkdke++++ ++elv
  OIT28996  12 LPPGFRFHPTDEELITYYLVNKISDASFTG-RAIADVDLNKSEPWDLPGKAKMGGKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSkTSELV 111
               79*************************999.89***************999999***************************************9867888* PP

       NAM 101 glkktLvfykgrapkgektdWvmheyrl 128
               g+kktLvfykgrap+gek++Wvmheyr+
  OIT28996 112 GMKKTLVFYKGRAPRGEKSNWVMHEYRI 139
               **************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MELEVNKEES SLPPGFRFHP TDEELITYYL VNKISDASFT GRAIADVDLN KSEPWDLPGK  60
AKMGGKEWYF FSLRDRKYPT GVRTNRATNT GYWKTTGKDK EIFNSKTSEL VGMKKTLVFY  120
KGRAPRGEKS NWVMHEYRIR SKSSYRTNKQ DEWVVCRIFQ KSAGLKKYPT NHSRTVINPY  180
SLEINQNAMS SQIMMQPADH GFQFAMGRNY INHASNYINN FPIQQPQMNY NIRGSSSGGG  240
GDGGGDNFFT ISGLNLNLGG GAAASSLPVL RPMPPPPPPP PQVMNIQQEV MTTSMLDNCA  300
ITSEAGYGAE MNSAHYCADL DNYWATY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.21e-106NAC family protein