PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT29321

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

WRKY

Protein Properties

Length: 169aa MW: 19174.7 Da PI: 10.1932

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT29321	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104	8e-33	90	148	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk++++prsYY+Ct++gC+vkk+v+r ++d+ vv++tYeg H+h+ OIT29321 90 LDDGYRWRKYGQKAVKNNNYPRSYYKCTHQGCNVKKQVQRLSKDGGVVVTTYEGMHTHP 148 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 169 aa Download sequence
MENQSMSFLG STGCYNSMNG WISGLKTEIS NSTARDQQNV SNIKNSPVAV GVVSSETHTT 60 NIISSLKKKG DKKIRKPRFA FQTRSQVDIL DDGYRWRKYG QKAVKNNNYP RSYYKCTHQG 120 CNVKKQVQRL SKDGGVVVTT YEGMHTHPID KPTDNFEQIL HQMHIIPPH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01970.1	5e-52	WRKY family protein

Link Out ? help Back to Top
Ensembl	OIT29321