PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT29368
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 94aa    MW: 10631.6 Da    PI: 10.0296
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT29368genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.11.3e-1215801890
              --HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
        B3 18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90
              +pk+ +   g+ ++ s++ +l+  +g++W v+l   k++ r  l +GWk+Fv +n+Lk g +++F+l++ +++
  OIT29368 15 IPKRLC---GYLPPISVKTMLR-CNGKEWAVTL---KSGVRKRLVNGWKQFVVDNNLKKGNVLLFELVEATSG 80
              677777...5556677666655.59********...5555567999********************9987766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    
MNPEPYLHII FLQFIPKRLC GYLPPISVKT MLRCNGKEWA VTLKSGVRKR LVNGWKQFVV  60
DNNLKKGNVL LFELVEATSG VVIFSVEELG LTNA