PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT29370
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 94aa    MW: 10779.8 Da    PI: 9.9465
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT29370genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B341.23.1e-1314801790
              E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
        B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90
               +pk+f+   g+ ++ s++ +l+  +g++W v+l+      r  l +GWk+Fv +n+Lk g +++F+l++ +++
  OIT29370 14 FIPKRFC---GYLPPISVKTMLRC-NGKEWAVTLKS---VVRRRLVNGWKQFVVDNNLKKGNVLLFELVEATSG 80
              69*****...55677887777665.9********43...22234899********************9987766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    
MNPEPYLYIM FLQFIPKRFC GYLPPISVKT MLRCNGKEWA VTLKSVVRRR LVNGWKQFVV  60
DNNLKKGNVL LFELVEATSG VVIFSVEELG LTNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.13e-07B3 family protein