PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT29386
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 99aa    MW: 11818.7 Da    PI: 6.5257
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT29386genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B333.76.4e-11474986
              HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
        B3  9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86
              ++ k++ + +pk+  e++    e   t  + +  g++W +++  + + +r +l++GWk+Fv   ++k g fv F+l++
  OIT29386  4 SYIKQDYMHIPKRLYEHIP---EA-NTTAVLQYGGKEWFMEM--NIGERR-WLKDGWKQFVMMSDIKRGCFVKFELVE 74
              5678899*******97764...22.35677788*********..666655.8***********************865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    
LKDSYIKQDY MHIPKRLYEH IPEANTTAVL QYGGKEWFME MNIGERRWLK DGWKQFVMMS  60
DIKRGCFVKF ELVEIAQLYV IFKLQVKGQG TEEDPVEIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06220.11e-07B3 family protein