PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT29435
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 165aa    MW: 18834.4 Da    PI: 6.6366
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT29435genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.98e-211465256
       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
              +y+G+r+++ +g+++AeIrdp+ ng  +r +lg+f taeeAa+a+++a+ +l+g+
  OIT29435 14 KYRGIRRRP-WGKYAAEIRDPNRNG--ARLWLGTFETAEEAARAYDRAAFSLRGH 65
              8********.**********96665..**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MDSNEDQRGR RENKYRGIRR RPWGKYAAEI RDPNRNGARL WLGTFETAEE AARAYDRAAF  60
SLRGHQAILN FPNDGHYNHN NNTNVPLDPR PSYASSMENA HMSASSSLPS SSSATGSSDQ  120
QENVTLEGHD HEEKVIEFEY LDNNLLDELL GSQVHRQANK RPKYF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.11e-22ERF family protein