PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT29506
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 157aa    MW: 17884.1 Da    PI: 4.48
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT29506genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.72.7e-10771303996
               EETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
        B3  39 edesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                +   ++W++ +    + ++  +++ Wk+Fv++n+Lk+gD +vF+l++ s+ + ++kv
  OIT29506  77 LTCGRKKWDMFY--YSNYNK--FSAEWKKFVDDNDLKVGDGLVFELSECSTNKIHFKV 130
               4556799**999..333344..7888*******************9854666555554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MESIPSSVHV SNHDDYSTRE IESTGIEEID NGEYWPLSGK PYVDMILTKT TVKPFYGMYL  60
PRKMNKELPA AGAPAVLTCG RKKWDMFYYS NYNKFSAEWK KFVDDNDLKV GDGLVFELSE  120
CSTNKIHFKV QILRGDFPSE LLPEDEEGAT DANPIEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.17e-08B3 family protein