PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT29557

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

FAR1

Protein Properties

Length: 260aa MW: 29262 Da PI: 5.8219

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT29557	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	86.5	4e-27	91	177	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +Y++YA+++GF +r+++ ++s rnge ++r++vC+keg++++++++ + +r+ r gCka++ vkke++gkw+v+kl++eHnH+l+ OIT29557 91 YYSTYATHLGFVMRVDAFRRSMRNGELVWRRLVCNKEGFSKSRQNQ--NGQRKCRAIREGCKAMIIVKKEQSGKWVVAKLVKEHNHPLV 177 8***************************************9988..778888889****************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence
MDENNYATDD AEMVESSSGK GLTTNGVEAE GRLNMELYVV DENNTTADDG EMVLSSSGME 60 LTRNGVEAEG RPNLEPYVGM EFESEEAAKA YYSTYATHLG FVMRVDAFRR SMRNGELVWR 120 RLVCNKEGFS KSRQNQNGQR KCRAIREGCK AMIIVKKEQS GKWVVAKLVK EHNHPLVVKP 180 ANTRIGSILC QTPDDKDVKI RELTAELQKE RKRSAVLQEQ LDMVLKDMED HSDQLSKNIN 240 DIVKSVKELE SRKIVSPNGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07500.1	7e-84	FAR1 family protein

Link Out ? help Back to Top
Ensembl	OIT29557