PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT29693
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NF-YB
Protein Properties Length: 205aa    MW: 22818.3 Da    PI: 7.0585
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT29693genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB175.17.2e-5522117297
     NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 
               +e d+flPianvsrimkk lPanakisk+aketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yv plk yl+kyre+egek
  OIT29693  22 KELDKFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKGYLNKYRETEGEK 117
               788*******************************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MTGKRSQNSP VGSPLSGDNS SKELDKFLPI ANVSRIMKKS LPANAKISKE AKETVQECVS  60
EFISFITGEA SDKCQREKRK TINGDDLLWA MTTLGFENYV GPLKGYLNKY RETEGEKNIM  120
ARNEEPFEPT NDNYIITSSN STTSYNNNIG VHGHGHDHVT KFAKRPEFIQ SFNNGNLAQS  180
FGDYGRVNVY GENLTSAANL HGVEW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.17e-63NF-YB family protein